2-eye MS S-rank techniques are normally more powerful than SS-ranks.
Case in point: Madara and Itachi
Madara: Could level mountains effortlessly with Susano'o.
Itachi: Forest fire amaterasu.
Both of these are S-rank MS techs (whether 2-eye or not) and were perfectly capable of devastating the landscape, with Madara's susano'o destroying as much if not more terrain as the Rinnegan's Chibaku Tensei. Regardless, for the effort that it's worth in terms of game mechanics (and that fact that the MS counter here is only 100/100), the MS techs are supposed to be that strong.